Online databases
 |
Pritzker Library interior
|
Updated 2/2/10
We always appreciate reports of links that no longer work, or of sites that you find particularly useful. Please send to: .
AREX: Arabidopsis Gene
Arrowsmith: Linking documents, disciplines, investigators and databases
-B-
BindingDB: Measured binding affinities for biomolecules and synthetic compounds
BioCyc Database Collection: Pathway/genome databases
Biological Magnetic Resonance Data Bank
BioModels Database: Mathematical models of biological interest
Biosystems Database: Pathways or diseases that interact in a biological system
BioToolKit: Online molecular biology and neuroinformatics resources
Biozon: Holdings of disparate molecular biology databases for ease of searching
-C-
Cancer Immunome Database: Antigens from abnormal cells
Carcinogen Potency Database
CarpeDB: Genes linked to epilepsy
Cell Centered Database: Cellular imaging data
Cold Spring Harbor Protocols
Comparative Toxigenomics Database: Interactions between chemicals and genes
Consensus CDS Database: Core set of human protein coding regions
COSMIC: Noninherited cancer mutations
Countway Library of Medicine BioResearch
CREB Target Gene Database
Crystallography Open Database: Searchable crystal structure database
Cytochrome P450 Database
-D-
Databases on Medicine and Molecular Biology
dbMHC: Major Histocompatibility Complex database
DOLOP: A Database of Bacterial Lipoproteins
DrugBank: Combines drug and data with drug target information
-E-
Elemental Data Index: NIST Physics Laboratory online data
Entrez, The Life Sciences Search Engine (search across databases)
eTBLAST: Find literature similar to known articles
-G-
GeMCRIS: Genetic Modification Clinical Research Information System
GenBank
GeneCards: Database of human genes
GeneTests: Laboratory and clinic directories; educational resources
Genetics Home Reference: Consumer information
GeneXPress: Parsing microarray data
Genetic Association Database: Human genetic associations
GermOnline: Microarray data
Germplasm Resources Information Network: Germplasm resources
GOLD: Genomes OnLine Database: Complete and ongoing genome projects
GPCRDB: Information System for G Protein-coupled Receptors
-H-
HCV Database: Hepatitis C Virus database: genetic and immunologic data
Homophila: Human Disease to Drosophila Gene Database
HuGE Navigator: Integrated, searchable knowledge base of genetic associations and human genome epidemiology
Human Gene Mutation Database
-I-
ISIHighlyCited.com: Highly cited authors
-L-
Ligand-Gated Ion Channel Database: Transmembrane proteins
Lipid Bank
LIPID MAPS: Lipid Metabolites and Pathways Strategy
-M-
MedlinePlus: Consumer information
Membrane Protein Databank: Membrane proteins and peptides
MEROPS: Peptidase database
Molecular biology databases and software: Annotated list of over 1700 tools
molmovdb.org: Database of Macromolecular Movements
Mouse Genome Informatics from the Jackson Laboratory
Mouse Phenome Database: Phenotypic and genotypic data for the laboratory mouse
Mouse Proteome Project
-O-
Online Mendelian Inheritance in Man (OMIM)
Oncogenomics Normal Tissue Database: Gene expression database
OrphaNet: Rare diseases
Ovarian Kaleidoscope Database: Genes expressed in the ovary
-P-
PenBase: Penaeidin Database
PharmGKB: The Pharmacogenetics and Pharmacogenomics Knowledge Base
PhenomicDB: Phenotype-genotype database
PhosphoSite: In vivo phosphorylation sites
Plasma Proteome Database
PRIDE: PRoteomics IDEntification database
ProteinDBS: Protein DataBase Search Engine
PubChem: Chemical structures of small organic molecules
PubMed: Medline, the world's largest biomedical literature database
-R-
RNAi Database: RNA interference studies
Rost Lab (formerly Columbia University Bioinformatics Center)
-S-
ScienceWatch: Tracking trends and performance in basic research
snoRNA-LBME-db: Small nucleolar RNA
Stanford Microarray Database
Stem Cells Portal: Sharing information about human embryonic stem cells (registration required)
-T-
Textpresso: An information retrieval and extraction system for biological literature
T1DBase: Genes implicated in Type 1 Diabetes
Toxic Substances Portal: From the Agency for Toxic Substances and Disease Registry
Transterm: RNA sequences and associated motifs
-V-
VADLO: Biomedical and life sciences search engine
-Z-
ZINC: Database of small molecules